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    GRAMM-X public web server for protein-protein docking

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    VakserI_NAR_34(2)W310.pdf (733.5Kb)
    Issue Date
    2006-07-01
    Author
    Tovchigrechko, Andrey
    Vakser, Ilya A.
    Publisher
    Oxford University Press
    Type
    Article
    Article Version
    Scholarly/refereed, publisher version
    Metadata
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    Abstract
    Protein docking software GRAMM-X and its web interface (http://vakser.bioinformatics.ku.edu/resources/gramm/grammx) extend the original GRAMM Fast Fourier Transformation methodology by employing smoothed potentials, refinement stage, and knowledge-based scoring. The web server frees users from complex installation of database-dependent parallel software and maintaining large hardware resources needed for protein docking simulations. Docking problems submitted to GRAMM-X server are processed by a 320 processor Linux cluster. The server was extensively tested by benchmarking, several months of public use, and participation in the CAPRI server track.
    Description
    This is the publisher's version, also available electronically from "http://nar.oxfordjournals.org".
    URI
    http://hdl.handle.net/1808/17606
    DOI
    https://doi.org/10.1093/nar/gkl206
    Collections
    • Molecular Biosciences Scholarly Works [581]
    Citation
    Tovchigrechko, A., & Vakser, I. (2006). GRAMM-X public web server for protein-protein docking. Nucleic Acids Research, 34(2), W310-W314. http://www.dx.doi.org/10.1093/nar/gkl206

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    Lawrence, KS 66045
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    Contact KU ScholarWorks
    785-864-8983
    KU Libraries
    1425 Jayhawk Blvd
    Lawrence, KS 66045
    785-864-8983

    KU Libraries
    1425 Jayhawk Blvd
    Lawrence, KS 66045
    Image Credits
     

     

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