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    LipidomeDB Data Calculation Environment: Online Processing of Direct-Infusion Mass Spectral Data for Lipid Profiles

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    Zhou_2011.pdf (890.1Kb)
    Issue Date
    2011-09
    Author
    Zhou, Zhenguo
    Marepally, Shantan Reddy
    Nune, Daya Sagar
    Pallakollu, Prashanth
    Ragan, Gail
    Roth, Mary R.
    Wang, Liangjiang
    Lushington, Gerald H.
    Visvanathan, Mahesh
    Welti, Ruth
    Publisher
    Springer Verlag
    Type
    Article
    Article Version
    Scholarly/refereed, author accepted manuscript
    Metadata
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    Abstract
    LipidomeDB Data Calculation Environment (DCE) is a web application to quantify complex lipids by processing data acquired after direct infusion of a lipid-containing biological extract, to which a cocktail of internal standards has been added, into an electrospray source of a triple quadrupole mass spectrometer. LipidomeDB DCE is located on the public Internet at http://lipidome.bcf.ku.edu:9000/Lipidomics. LipidomeDB DCE supports targeted analyses; analyte information can be entered, or pre-formulated lists of typical plant or animal polar lipid analytes can be selected. LipidomeDB DCE performs isotopic deconvolution and quantification in comparison to internal standard spectral peaks. Multiple precursor or neutral loss spectra from up to 35 samples may be processed simultaneously with data input as Excel files and output as tables viewable on the web and exportable in Excel. The pre-formulated compound lists and web access, used with direct-infusion mass spectrometry, provide a simple approach to lipidomic analysis, particularly for new users.
    Description
    The final publication is available at Springer via http://dx.doi.org/10.1007/s11745-011-3575-8.
    URI
    http://hdl.handle.net/1808/24560
    DOI
    https://doi.org/10.1007/s11745-011-3575-8
    Collections
    • Chemistry Scholarly Works [553]
    Citation
    Zhou, Z., Marepally, S. R., Nune, D. S., Pallakollu, P., Ragan, G., Roth, M. R., … Welti, R. (2011). LipidomeDB Data Calculation Environment: Online Processing of Direct-Infusion Mass Spectral Data for Lipid Profiles. Lipids, 46(9), 879–884. http://doi.org/10.1007/s11745-011-3575-8

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    Contact KU ScholarWorks
    785-864-8983
    KU Libraries
    1425 Jayhawk Blvd
    Lawrence, KS 66045
    785-864-8983

    KU Libraries
    1425 Jayhawk Blvd
    Lawrence, KS 66045
    Image Credits
     

     

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