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dc.contributor.authorSanders, Steven M.
dc.contributor.authorShcheglovitova, Mariya
dc.contributor.authorCartwright, Paulyn
dc.date.accessioned2014-08-12T21:46:57Z
dc.date.available2014-08-12T21:46:57Z
dc.date.issued2014-01-01
dc.identifier.citationSanders, S.M., Shcheglovitova, M., and Cartwright, P. (2014) Differential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria). BMC Genomics, 15:406, 1471-2164. http://dx.doi.org/10.1186/1471-2164-15-406
dc.identifier.urihttp://hdl.handle.net/1808/14912
dc.description.abstractBackground: A colony of the hydrozoan Hydractinia symbiolongicarpus comprises genetically identical yet morphologically distinct and functionally specialized polyp types. The main labor divisions are between feeding, reproduction and defense. In H. symbiolongicarpus, the feeding polyp (called a gastrozooid) has elongated tentacles and a mouth, which are absent in the reproductive polyp (gonozooid) and defensive polyp (dactylozooid). Instead, the dactylozooid has an extended body column with an abundance of stinging cells (nematocysts) and the gonozooid bears gonophores on its body column. Morphological differences between polyp types can be attributed to simple changes in their axial patterning during development, and it has long been hypothesized that these specialized polyps arose through evolutionary alterations in oral-aboral patterning of the ancestral gastrozooid. Results: An assembly of 66,508 transcripts (>200 bp) were generated using short-read Illumina RNA-Seq libraries constructed from feeding, reproductive, and defensive polyps of H. symbiolongicarpus. Using several different annotation methods, approximately 54% of the transcripts were annotated. Differential expression analyses were conducted between these three polyp types to isolate genes that may be involved in functional, histological, and pattering differences between polyp types. Nearly 7 K transcripts were differentially expressed in a polyp-specific manner, including members of the homeodomain, myosin, toxin and BMP gene families. We report the spatial expression of a subset of these polyp-specific transcripts to validate our differential expression analyses. Conclusions: While potentially originating through simple changes in patterning, polymorphic polyps in Hydractinia are the result of differentially expressed functional, structural, and patterning genes. The differentially expressed genes identified in our study provide a starting point for future investigations of the developmental patterning and functional differences that are displayed in the different polyp types that confer a division of labor within a colony of H. symbiolongicarpus.
dc.language.isoen
dc.publisherBioMed Central
dc.rightsThis is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
dc.rights.urihttp://creativecommons.org/licenses/by/2.0
dc.subjectHydractinia symbiolongicarpus
dc.subjectRNA-Seq
dc.subjectPolymorphism
dc.subjectDifferential expression
dc.subjectTranscriptome assembly
dc.subjectAnnotation
dc.titleDifferential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria)
dc.typeArticle
kusw.kuauthorSanders, Steven M.
kusw.kuauthorShcheglovitova, Mariya
kusw.kuauthorCartwright, Paulyn
kusw.kudepartmentEcology and Evolutionary Biology
kusw.oastatusfullparticipation
dc.identifier.doi10.1186/1471-2164-15-406
dc.identifier.orcidhttps://orcid.org/0000-0002-5334-4785
kusw.oaversionScholarly/refereed, publisher version
kusw.oapolicyThis item meets KU Open Access policy criteria.
dc.rights.accessrightsopenAccess


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This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Except where otherwise noted, this item's license is described as: This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.